{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 35570902, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30441217, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 85.58, 
            "paired": 35570902, 
            "paired_qc_failed": 0, 
            "read1": 17785451, 
            "read1_qc_failed": 0, 
            "read2": 17785451, 
            "read2_qc_failed": 0, 
            "paired_properly": 29635808, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 83.31, 
            "with_itself": 29921840, 
            "with_itself_qc_failed": 0, 
            "singletons": 519377, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.46, 
            "diff_chroms": 198405, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 65266666, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 62068581, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.1, 
            "paired": 65266666, 
            "paired_qc_failed": 0, 
            "read1": 32633333, 
            "read1_qc_failed": 0, 
            "read2": 32633333, 
            "read2_qc_failed": 0, 
            "paired_properly": 52881751, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 81.02, 
            "with_itself": 60433888, 
            "with_itself_qc_failed": 0, 
            "singletons": 1634693, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.5, 
            "diff_chroms": 5291648, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 13591183, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 327679, 
            "paired_opt_dupes": 2522, 
            "dupes_pct": 0.02411
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 20779273, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 269236, 
            "paired_opt_dupes": 2954, 
            "dupes_pct": 0.012957
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 13590957, 
            "distinct_read_pairs": 13263281, 
            "one_read_pair": 12942282, 
            "two_read_pair": 314457, 
            "NRF": 0.97589, 
            "PBC1": 0.975798, 
            "PBC2": 41.157557
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 20779235, 
            "distinct_read_pairs": 20509999, 
            "one_read_pair": 20243741, 
            "two_read_pair": 263299, 
            "NRF": 0.987043, 
            "PBC1": 0.987018, 
            "PBC2": 76.88499
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 26527008, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26527008, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 26527008, 
            "paired_qc_failed": 0, 
            "read1": 13263504, 
            "read1_qc_failed": 0, 
            "read2": 13263504, 
            "read2_qc_failed": 0, 
            "paired_properly": 26527008, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 26527008, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 41020074, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41020074, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 41020074, 
            "paired_qc_failed": 0, 
            "read1": 20510037, 
            "read1_qc_failed": 0, 
            "read2": 20510037, 
            "read2_qc_failed": 0, 
            "paired_properly": 41020074, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 41020074, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 24802, 
        "Np": 0, 
        "N_opt": 24802, 
        "N_consv": 24802, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 14995856, 
            "est_frag_len": 245, 
            "corr_est_frag_len": 0.483943181039571, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.3993297, 
            "argmin_corr": 1500, 
            "min_corr": 0.1658692, 
            "NSC": 2.917619, 
            "RSC": 1.362432
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.602116361706
        }, 
        "rep1-pr1": {
            "FRiP": 0.601726405274
        }, 
        "rep1-pr2": {
            "FRiP": 0.601896589682
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.5941261819
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0538500253243, 
            "auc": 0.491956360633, 
            "ch_div": 0.571106970346, 
            "elbow_pt": 6.88223534698e-132, 
            "jsd": 0.838988675986, 
            "syn_auc": 0.498224292382, 
            "syn_elbow_pt": 0.474278868664, 
            "syn_jsd": 0.613262527193
        }
    ]
}