{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 69251344, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 65682465, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.85, 
            "paired": 69251344, 
            "paired_qc_failed": 0, 
            "read1": 34625672, 
            "read1_qc_failed": 0, 
            "read2": 34625672, 
            "read2_qc_failed": 0, 
            "paired_properly": 63025696, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 91.01, 
            "with_itself": 64763403, 
            "with_itself_qc_failed": 0, 
            "singletons": 919062, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.33, 
            "diff_chroms": 1337787, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 44822058, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42270277, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.31, 
            "paired": 44822058, 
            "paired_qc_failed": 0, 
            "read1": 22411029, 
            "read1_qc_failed": 0, 
            "read2": 22411029, 
            "read2_qc_failed": 0, 
            "paired_properly": 39106937, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 87.25, 
            "with_itself": 41498214, 
            "with_itself_qc_failed": 0, 
            "singletons": 772063, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.72, 
            "diff_chroms": 1698756, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 28431119, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 208949, 
            "paired_opt_dupes": 2745, 
            "dupes_pct": 0.007349
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 17000414, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 184749, 
            "paired_opt_dupes": 1571, 
            "dupes_pct": 0.010867
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 28430857, 
            "distinct_read_pairs": 28221909, 
            "one_read_pair": 28014288, 
            "two_read_pair": 206300, 
            "NRF": 0.992651, 
            "PBC1": 0.992643, 
            "PBC2": 135.793931
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 16997550, 
            "distinct_read_pairs": 16812850, 
            "one_read_pair": 16629884, 
            "two_read_pair": 181248, 
            "NRF": 0.989134, 
            "PBC1": 0.989117, 
            "PBC2": 91.752097
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 56444340, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56444340, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 56444340, 
            "paired_qc_failed": 0, 
            "read1": 28222170, 
            "read1_qc_failed": 0, 
            "read2": 28222170, 
            "read2_qc_failed": 0, 
            "paired_properly": 56444340, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 56444340, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 33631330, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33631330, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 33631330, 
            "paired_qc_failed": 0, 
            "read1": 16815665, 
            "read1_qc_failed": 0, 
            "read2": 16815665, 
            "read2_qc_failed": 0, 
            "paired_properly": 33631330, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 33631330, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 95520, 
        "Np": 0, 
        "N_opt": 95520, 
        "N_consv": 95520, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 270, 
            "corr_est_frag_len": 0.201701519033305, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.19238, 
            "argmin_corr": 1500, 
            "min_corr": 0.1838874, 
            "NSC": 1.096875, 
            "RSC": 2.097609
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.23877156928
        }, 
        "rep1-pr1": {
            "FRiP": 0.263193773915
        }, 
        "rep1-pr2": {
            "FRiP": 0.263324754655
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.201084749441
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.139322958534, 
            "auc": 0.494529307666, 
            "ch_div": 0.399250665264, 
            "elbow_pt": 7.38977164106e-287, 
            "jsd": 0.68141677846, 
            "syn_auc": 0.504996316438, 
            "syn_elbow_pt": 0.120054185693, 
            "syn_jsd": 0.406345000188
        }
    ]
}