/cemt/A36016_3_lane_gembs/C419NANXX_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 414889774 | 100.00 % | 207444887 | 100.00 % | 207444887 | 100.00 % |
| General Reads | 399407699 | 96.27 % | 202254499 | 97.50 % | 197153200 | 95.04 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 78247 | 0.02 % | 39571 | 0.02 % | 38676 | 0.02 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15403828 | 3.71 % | 5150817 | 2.48 % | 10253011 | 4.94 % |
| Bisulfite_reads C2T | 204576288 | 49.31 % | 103577430 | 49.93 % | 100998858 | 48.69 % |
| Bisulfite_reads G2A | 194909658 | 46.98 % | 98716640 | 47.59 % | 96193018 | 46.37 % |
| Concept | Value |
|---|---|
| Unique Fragments | 148350972 |
| Average Unique | 71.51 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 20368863155 | 38.96 % | 8816177487 | 33.73 % | 11552685668 | 44.20 % |
| Base Counts Overall C | 5260476299 | 10.06 % | 306825324 | 1.17 % | 4953650975 | 18.95 % |
| Base Counts Overall G | 5342816225 | 10.22 % | 5056233003 | 19.34 % | 286583222 | 1.10 % |
| Base Counts Overall T | 20560437363 | 39.33 % | 11750826750 | 44.96 % | 8809610613 | 33.70 % |
| Base Counts Overall N | 743518482 | 1.42 % | 207993198 | 0.80 % | 535525284 | 2.05 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9925376525730952 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 170919688 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 207444887 |
| 125 | 207444887 |
| Insert Size Histogram |
|---|
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