/cemt/A36014_3_lane_gembs/C62LRANXX_1_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 540069282 | 100.00 % | 270034641 | 100.00 % | 270034641 | 100.00 % |
| General Reads | 532492767 | 98.60 % | 267198092 | 98.95 % | 265294675 | 98.24 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 79233 | 0.01 % | 39761 | 0.01 % | 39472 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7497282 | 1.39 % | 2796788 | 1.04 % | 4700494 | 1.74 % |
| Bisulfite_reads C2T | 270956136 | 50.17 % | 135945206 | 50.34 % | 135010930 | 50.00 % |
| Bisulfite_reads G2A | 261615864 | 48.44 % | 131292647 | 48.62 % | 130323217 | 48.26 % |
| Concept | Value |
|---|---|
| Unique Fragments | 214815977 |
| Average Unique | 79.55 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 27003804938 | 39.68 % | 11417169666 | 33.56 % | 15586635272 | 45.81 % |
| Base Counts Overall C | 6761986297 | 9.94 % | 283565195 | 0.83 % | 6478421102 | 19.04 % |
| Base Counts Overall G | 6845279346 | 10.06 % | 6516829549 | 19.15 % | 328449797 | 0.97 % |
| Base Counts Overall T | 26881226008 | 39.50 % | 15533978111 | 45.66 % | 11347247897 | 33.35 % |
| Base Counts Overall N | 556432943 | 0.82 % | 272822245 | 0.80 % | 283610698 | 0.83 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9948157510762682 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 241010158 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 270034641 |
| 125 | 270034641 |
| Insert Size Histogram |
|---|
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