/cemt/A36014_3_lane_gembs/C62LRANXX_2_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 539554448 | 100.00 % | 269777224 | 100.00 % | 269777224 | 100.00 % |
| General Reads | 531830961 | 98.57 % | 266887522 | 98.93 % | 264943439 | 98.21 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 79122 | 0.01 % | 39715 | 0.01 % | 39407 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7644365 | 1.42 % | 2849987 | 1.06 % | 4794378 | 1.78 % |
| Bisulfite_reads C2T | 270629698 | 50.16 % | 135792655 | 50.34 % | 134837043 | 49.98 % |
| Bisulfite_reads G2A | 261280385 | 48.43 % | 131134582 | 48.61 % | 130145803 | 48.24 % |
| Concept | Value |
|---|---|
| Unique Fragments | 214262614 |
| Average Unique | 79.42 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 27004883725 | 39.72 % | 11405005221 | 33.55 % | 15599878504 | 45.89 % |
| Base Counts Overall C | 6760597270 | 9.94 % | 285207086 | 0.84 % | 6475390184 | 19.05 % |
| Base Counts Overall G | 6847415799 | 10.07 % | 6518542303 | 19.18 % | 328873496 | 0.97 % |
| Base Counts Overall T | 26820215956 | 39.45 % | 15513041252 | 45.64 % | 11307174704 | 33.26 % |
| Base Counts Overall N | 550747698 | 0.81 % | 270134362 | 0.79 % | 280613336 | 0.83 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9949334697118941 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 240421026 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 269777224 |
| 125 | 269777224 |
| Insert Size Histogram |
|---|
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