/cemt/A34042_3_lane_gembs/C46APANXX_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 483376376 | 100.00 % | 241688188 | 100.00 % | 241688188 | 100.00 % |
| General Reads | 472829184 | 97.82 % | 237273457 | 98.17 % | 235555727 | 97.46 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 31335 | 0.01 % | 15711 | 0.01 % | 15624 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10515857 | 2.18 % | 4399020 | 1.82 % | 6116837 | 2.53 % |
| Bisulfite_reads C2T | 241812877 | 50.03 % | 121341201 | 50.21 % | 120471676 | 49.85 % |
| Bisulfite_reads G2A | 231047642 | 47.80 % | 115947967 | 47.97 % | 115099675 | 47.62 % |
| Concept | Value |
|---|---|
| Unique Fragments | 188659930 |
| Average Unique | 78.06 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24201187707 | 39.74 % | 10803255190 | 35.48 % | 13397932517 | 44.00 % |
| Base Counts Overall C | 6109053640 | 10.03 % | 316414678 | 1.04 % | 5792638962 | 19.02 % |
| Base Counts Overall G | 6130645792 | 10.07 % | 5828626373 | 19.14 % | 302019419 | 0.99 % |
| Base Counts Overall T | 23972396326 | 39.36 % | 13262206249 | 43.55 % | 10710190077 | 35.17 % |
| Base Counts Overall N | 492139911 | 0.81 % | 242209198 | 0.80 % | 249930713 | 0.82 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9927892989528423 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 213699283 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 241688188 |
| 125 | 241688188 |
| Insert Size Histogram |
|---|
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