/cemt/A34042_3_lane_gembs/C62HTANXX_5_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 512502524 | 100.00 % | 256251262 | 100.00 % | 256251262 | 100.00 % |
| General Reads | 502305216 | 98.01 % | 252170985 | 98.41 % | 250134231 | 97.61 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 32589 | 0.01 % | 16308 | 0.01 % | 16281 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10164719 | 1.98 % | 4063969 | 1.59 % | 6100750 | 2.38 % |
| Bisulfite_reads C2T | 256834415 | 50.11 % | 128926979 | 50.31 % | 127907436 | 49.91 % |
| Bisulfite_reads G2A | 245503390 | 47.90 % | 123260314 | 48.10 % | 122243076 | 47.70 % |
| Concept | Value |
|---|---|
| Unique Fragments | 200991540 |
| Average Unique | 78.44 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 25610634836 | 39.66 % | 11382148464 | 35.25 % | 14228486372 | 44.07 % |
| Base Counts Overall C | 6403646490 | 9.92 % | 297914108 | 0.92 % | 6105732382 | 18.91 % |
| Base Counts Overall G | 6432426135 | 9.96 % | 6124125923 | 18.97 % | 308300212 | 0.95 % |
| Base Counts Overall T | 25568801933 | 39.60 % | 14226630123 | 44.06 % | 11342171810 | 35.13 % |
| Base Counts Overall N | 559808630 | 0.87 % | 256840394 | 0.80 % | 302968236 | 0.94 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9939207323580608 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 227607559 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 256251262 |
| 125 | 256251262 |
| Insert Size Histogram |
|---|
 |