{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 79217096, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 71790264, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 90.62, 
            "paired": 79217096, 
            "paired_qc_failed": 0, 
            "read1": 39608548, 
            "read1_qc_failed": 0, 
            "read2": 39608548, 
            "read2_qc_failed": 0, 
            "paired_properly": 68934968, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 87.02, 
            "with_itself": 70207189, 
            "with_itself_qc_failed": 0, 
            "singletons": 1583075, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.0, 
            "diff_chroms": 853772, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 52392786, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 49028461, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.58, 
            "paired": 52392786, 
            "paired_qc_failed": 0, 
            "read1": 26196393, 
            "read1_qc_failed": 0, 
            "read2": 26196393, 
            "read2_qc_failed": 0, 
            "paired_properly": 42386284, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 80.9, 
            "with_itself": 47560814, 
            "with_itself_qc_failed": 0, 
            "singletons": 1467647, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.8, 
            "diff_chroms": 3739781, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 30198457, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 336325, 
            "paired_opt_dupes": 2237, 
            "dupes_pct": 0.011137
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 17509183, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 332500, 
            "paired_opt_dupes": 1946, 
            "dupes_pct": 0.01899
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30197929, 
            "distinct_read_pairs": 29861615, 
            "one_read_pair": 29528488, 
            "two_read_pair": 329961, 
            "NRF": 0.988863, 
            "PBC1": 0.988844, 
            "PBC2": 89.490843
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 17509057, 
            "distinct_read_pairs": 17176560, 
            "one_read_pair": 16849216, 
            "two_read_pair": 322257, 
            "NRF": 0.98101, 
            "PBC1": 0.980942, 
            "PBC2": 52.285027
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 59724264, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 59724264, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 59724264, 
            "paired_qc_failed": 0, 
            "read1": 29862132, 
            "read1_qc_failed": 0, 
            "read2": 29862132, 
            "read2_qc_failed": 0, 
            "paired_properly": 59724264, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 59724264, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 34353366, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34353366, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 34353366, 
            "paired_qc_failed": 0, 
            "read1": 17176683, 
            "read1_qc_failed": 0, 
            "read2": 17176683, 
            "read2_qc_failed": 0, 
            "paired_properly": 34353366, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 34353366, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 116350, 
        "Np": 0, 
        "N_opt": 116350, 
        "N_consv": 116350, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 265, 
            "corr_est_frag_len": 0.190848844622797, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1898982, 
            "argmin_corr": 1500, 
            "min_corr": 0.1786166, 
            "NSC": 1.068483, 
            "RSC": 1.084263
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.181203159976
        }, 
        "rep1-pr1": {
            "FRiP": 0.201177725948
        }, 
        "rep1-pr2": {
            "FRiP": 0.200659046762
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.116837853545
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.16853212323, 
            "auc": 0.494684861877, 
            "ch_div": 0.319840776365, 
            "elbow_pt": 5.41760524472e-304, 
            "jsd": 0.66340915316, 
            "syn_auc": 0.497160808388, 
            "syn_elbow_pt": 0.0375676298474, 
            "syn_jsd": 0.379542328393
        }
    ]
}