{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 38420512, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28457103, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 74.07, 
            "paired": 38420512, 
            "paired_qc_failed": 0, 
            "read1": 19210256, 
            "read1_qc_failed": 0, 
            "read2": 19210256, 
            "read2_qc_failed": 0, 
            "paired_properly": 26190563, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 68.17, 
            "with_itself": 27304029, 
            "with_itself_qc_failed": 0, 
            "singletons": 1153074, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 3.0, 
            "diff_chroms": 862515, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 62419198, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 59332552, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.05, 
            "paired": 62419198, 
            "paired_qc_failed": 0, 
            "read1": 31209599, 
            "read1_qc_failed": 0, 
            "read2": 31209599, 
            "read2_qc_failed": 0, 
            "paired_properly": 52461075, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 84.05, 
            "with_itself": 57668835, 
            "with_itself_qc_failed": 0, 
            "singletons": 1663717, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.67, 
            "diff_chroms": 3447428, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 11690061, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 306615, 
            "paired_opt_dupes": 1004, 
            "dupes_pct": 0.026229
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 21847540, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 249487, 
            "paired_opt_dupes": 2578, 
            "dupes_pct": 0.011419
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 11685229, 
            "distinct_read_pairs": 11378744, 
            "one_read_pair": 11078835, 
            "two_read_pair": 293459, 
            "NRF": 0.973772, 
            "PBC1": 0.973643, 
            "PBC2": 37.752582
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 21831865, 
            "distinct_read_pairs": 21582817, 
            "one_read_pair": 21336142, 
            "two_read_pair": 244317, 
            "NRF": 0.988592, 
            "PBC1": 0.988571, 
            "PBC2": 87.329748
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22766892, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22766892, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 22766892, 
            "paired_qc_failed": 0, 
            "read1": 11383446, 
            "read1_qc_failed": 0, 
            "read2": 11383446, 
            "read2_qc_failed": 0, 
            "paired_properly": 22766892, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 22766892, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 43196106, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43196106, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 43196106, 
            "paired_qc_failed": 0, 
            "read1": 21598053, 
            "read1_qc_failed": 0, 
            "read2": 21598053, 
            "read2_qc_failed": 0, 
            "paired_properly": 43196106, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 43196106, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 43407, 
        "Np": 0, 
        "N_opt": 43407, 
        "N_consv": 43407, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 13694316, 
            "est_frag_len": 235, 
            "corr_est_frag_len": 0.257742046710156, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.241849, 
            "argmin_corr": 1500, 
            "min_corr": 0.175909, 
            "NSC": 1.465201, 
            "RSC": 1.241024
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.434773029431
        }, 
        "rep1-pr1": {
            "FRiP": 0.422927873235
        }, 
        "rep1-pr2": {
            "FRiP": 0.423258313923
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.396927464051
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.103105415429, 
            "auc": 0.491362835815, 
            "ch_div": 0.42089868546, 
            "elbow_pt": 3.25943798967e-114, 
            "jsd": 0.773567251462, 
            "syn_auc": 0.494210571539, 
            "syn_elbow_pt": 0.323604926376, 
            "syn_jsd": 0.496929071718
        }
    ]
}