{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 33187516, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29631530, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 89.29, 
            "paired": 33187516, 
            "paired_qc_failed": 0, 
            "read1": 16593758, 
            "read1_qc_failed": 0, 
            "read2": 16593758, 
            "read2_qc_failed": 0, 
            "paired_properly": 28725962, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 86.56, 
            "with_itself": 29001267, 
            "with_itself_qc_failed": 0, 
            "singletons": 630263, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.9, 
            "diff_chroms": 169754, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 62419198, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 59332552, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.05, 
            "paired": 62419198, 
            "paired_qc_failed": 0, 
            "read1": 31209599, 
            "read1_qc_failed": 0, 
            "read2": 31209599, 
            "read2_qc_failed": 0, 
            "paired_properly": 52461075, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 84.05, 
            "with_itself": 57668835, 
            "with_itself_qc_failed": 0, 
            "singletons": 1663717, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.67, 
            "diff_chroms": 3447428, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 12815943, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 353261, 
            "paired_opt_dupes": 1251, 
            "dupes_pct": 0.027564
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 21847540, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 249487, 
            "paired_opt_dupes": 2578, 
            "dupes_pct": 0.011419
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 12805481, 
            "distinct_read_pairs": 12452527, 
            "one_read_pair": 12107774, 
            "two_read_pair": 336729, 
            "NRF": 0.972437, 
            "PBC1": 0.972315, 
            "PBC2": 35.957028
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 21831865, 
            "distinct_read_pairs": 21582817, 
            "one_read_pair": 21336142, 
            "two_read_pair": 244317, 
            "NRF": 0.988592, 
            "PBC1": 0.988571, 
            "PBC2": 87.329748
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 24925364, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24925364, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 24925364, 
            "paired_qc_failed": 0, 
            "read1": 12462682, 
            "read1_qc_failed": 0, 
            "read2": 12462682, 
            "read2_qc_failed": 0, 
            "paired_properly": 24925364, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 24925364, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 43196106, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43196106, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 43196106, 
            "paired_qc_failed": 0, 
            "read1": 21598053, 
            "read1_qc_failed": 0, 
            "read2": 21598053, 
            "read2_qc_failed": 0, 
            "paired_properly": 43196106, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 43196106, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 30019, 
        "Np": 0, 
        "N_opt": 30019, 
        "N_consv": 30019, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 14707128, 
            "est_frag_len": 265, 
            "corr_est_frag_len": 0.28644225837886, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2659909, 
            "argmin_corr": 1500, 
            "min_corr": 0.1781483, 
            "NSC": 1.607886, 
            "RSC": 1.232818
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.405560935543
        }, 
        "rep1-pr1": {
            "FRiP": 0.412853518579
        }, 
        "rep1-pr2": {
            "FRiP": 0.41247799844
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.393065158582
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.144030973338, 
            "auc": 0.491760168192, 
            "ch_div": 0.274264007597, 
            "elbow_pt": 1.28635868309e-125, 
            "jsd": 0.747762283201, 
            "syn_auc": 0.509571677163, 
            "syn_elbow_pt": 0.362188515579, 
            "syn_jsd": 0.48395588742
        }
    ]
}