/CEMT/A36002_3_lane_gembs/C6HT8ANXX_1_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 347084102 | 100.00 % | 173542051 | 100.00 % | 173542051 | 100.00 % |
| General Reads | 340266619 | 98.04 % | 170434437 | 98.21 % | 169832182 | 97.86 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 17939 | 0.01 % | 8986 | 0.01 % | 8953 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6799544 | 1.96 % | 3098628 | 1.79 % | 3700916 | 2.13 % |
| Bisulfite_reads C2T | 172983326 | 49.84 % | 86633852 | 49.92 % | 86349474 | 49.76 % |
| Bisulfite_reads G2A | 167301232 | 48.20 % | 83809571 | 48.29 % | 83491661 | 48.11 % |
| Concept | Value |
|---|---|
| Unique Fragments | 138566647 |
| Average Unique | 79.85 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 17287049975 | 39.53 % | 7486498265 | 34.24 % | 9800551710 | 44.82 % |
| Base Counts Overall C | 4408497423 | 10.08 % | 227365774 | 1.04 % | 4181131649 | 19.12 % |
| Base Counts Overall G | 4443585157 | 10.16 % | 4199836585 | 19.21 % | 243748572 | 1.11 % |
| Base Counts Overall T | 17245900796 | 39.43 % | 9778696975 | 44.72 % | 7467203821 | 34.15 % |
| Base Counts Overall N | 347563501 | 0.79 % | 173900827 | 0.80 % | 173662674 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9789259200435435 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 155945883 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 173542051 |
| 125 | 173542051 |
| Insert Size Histogram |
|---|
 |