{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 78298184, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 75080183, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.89, 
            "paired": 78298184, 
            "paired_qc_failed": 0, 
            "read1": 39149092, 
            "read1_qc_failed": 0, 
            "read2": 39149092, 
            "read2_qc_failed": 0, 
            "paired_properly": 72780855, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.95, 
            "with_itself": 74204326, 
            "with_itself_qc_failed": 0, 
            "singletons": 875857, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.12, 
            "diff_chroms": 1067046, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 53978528, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 49170794, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.09, 
            "paired": 53978528, 
            "paired_qc_failed": 0, 
            "read1": 26989264, 
            "read1_qc_failed": 0, 
            "read2": 26989264, 
            "read2_qc_failed": 0, 
            "paired_properly": 47390120, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 87.79, 
            "with_itself": 48351210, 
            "with_itself_qc_failed": 0, 
            "singletons": 819584, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.52, 
            "diff_chroms": 552130, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 32483451, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 401229, 
            "paired_opt_dupes": 4925, 
            "dupes_pct": 0.012352
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 19556389, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 746028, 
            "paired_opt_dupes": 2627, 
            "dupes_pct": 0.038148
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32483237, 
            "distinct_read_pairs": 32082008, 
            "one_read_pair": 31685010, 
            "two_read_pair": 392799, 
            "NRF": 0.987648, 
            "PBC1": 0.987626, 
            "PBC2": 80.664691
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 19556328, 
            "distinct_read_pairs": 18810303, 
            "one_read_pair": 18088069, 
            "two_read_pair": 699092, 
            "NRF": 0.961853, 
            "PBC1": 0.961604, 
            "PBC2": 25.87366
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 64164444, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 64164444, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 64164444, 
            "paired_qc_failed": 0, 
            "read1": 32082222, 
            "read1_qc_failed": 0, 
            "read2": 32082222, 
            "read2_qc_failed": 0, 
            "paired_properly": 64164444, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 64164444, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 37620722, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37620722, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 37620722, 
            "paired_qc_failed": 0, 
            "read1": 18810361, 
            "read1_qc_failed": 0, 
            "read2": 18810361, 
            "read2_qc_failed": 0, 
            "paired_properly": 37620722, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 37620722, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 188809, 
        "Np": 0, 
        "N_opt": 188809, 
        "N_consv": 188809, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 265, 
            "corr_est_frag_len": 0.25999590885269, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2355392, 
            "argmin_corr": 1500, 
            "min_corr": 0.2188008, 
            "NSC": 1.188277, 
            "RSC": 2.461115
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.65819134513
        }, 
        "rep1-pr1": {
            "FRiP": 0.660386687766
        }, 
        "rep1-pr2": {
            "FRiP": 0.660153566448
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.63583945556
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0640435625295, 
            "auc": 0.494880171546, 
            "ch_div": 0.510282380602, 
            "elbow_pt": 0.0, 
            "jsd": 0.847743594255, 
            "syn_auc": 0.499396959748, 
            "syn_elbow_pt": 0.223973543952, 
            "syn_jsd": 0.579262773391
        }
    ]
}