/cemt/A35999_3_lane_gembs/C4154ANXX_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 544487710 | 100.00 % | 272243855 | 100.00 % | 272243855 | 100.00 % |
| General Reads | 531259089 | 97.57 % | 267071989 | 98.10 % | 264187100 | 97.04 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 40985 | 0.01 % | 20573 | 0.01 % | 20412 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 13187636 | 2.42 % | 5151293 | 1.89 % | 8036343 | 2.95 % |
| Bisulfite_reads C2T | 271838864 | 49.93 % | 136631826 | 50.19 % | 135207038 | 49.66 % |
| Bisulfite_reads G2A | 259461210 | 47.65 % | 130460736 | 47.92 % | 129000474 | 47.38 % |
| Concept | Value |
|---|---|
| Unique Fragments | 199711219 |
| Average Unique | 73.36 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 27202860703 | 39.65 % | 12065331205 | 35.17 % | 15137529498 | 44.13 % |
| Base Counts Overall C | 6796682847 | 9.91 % | 294803943 | 0.86 % | 6501878904 | 18.95 % |
| Base Counts Overall G | 6882508260 | 10.03 % | 6555481861 | 19.11 % | 327026399 | 0.95 % |
| Base Counts Overall T | 27173727660 | 39.61 % | 15114314936 | 44.06 % | 12059412724 | 35.16 % |
| Base Counts Overall N | 549671990 | 0.80 % | 272793785 | 0.80 % | 276878205 | 0.81 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.993891424542442 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 228032549 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 272243855 |
| 125 | 272243855 |
| Insert Size Histogram |
|---|
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