{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 58435034, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 52308649, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 89.52, 
            "paired": 58435034, 
            "paired_qc_failed": 0, 
            "read1": 29217517, 
            "read1_qc_failed": 0, 
            "read2": 29217517, 
            "read2_qc_failed": 0, 
            "paired_properly": 51260080, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 87.72, 
            "with_itself": 51549453, 
            "with_itself_qc_failed": 0, 
            "singletons": 759196, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.3, 
            "diff_chroms": 155659, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 45100544, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42784977, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.87, 
            "paired": 45100544, 
            "paired_qc_failed": 0, 
            "read1": 22550272, 
            "read1_qc_failed": 0, 
            "read2": 22550272, 
            "read2_qc_failed": 0, 
            "paired_properly": 34886479, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 77.35, 
            "with_itself": 41495730, 
            "with_itself_qc_failed": 0, 
            "singletons": 1289247, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.86, 
            "diff_chroms": 4523333, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 23562258, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 596649, 
            "paired_opt_dupes": 5443, 
            "dupes_pct": 0.025322
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 13208684, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 154251, 
            "paired_opt_dupes": 1783, 
            "dupes_pct": 0.011678
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 23561894, 
            "distinct_read_pairs": 22965256, 
            "one_read_pair": 22381449, 
            "two_read_pair": 571231, 
            "NRF": 0.974678, 
            "PBC1": 0.974579, 
            "PBC2": 39.181083
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 13208667, 
            "distinct_read_pairs": 13054416, 
            "one_read_pair": 12901708, 
            "two_read_pair": 151186, 
            "NRF": 0.988322, 
            "PBC1": 0.988302, 
            "PBC2": 85.336658
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 45931218, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 45931218, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 45931218, 
            "paired_qc_failed": 0, 
            "read1": 22965609, 
            "read1_qc_failed": 0, 
            "read2": 22965609, 
            "read2_qc_failed": 0, 
            "paired_properly": 45931218, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 45931218, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26108866, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26108866, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 26108866, 
            "paired_qc_failed": 0, 
            "read1": 13054433, 
            "read1_qc_failed": 0, 
            "read2": 13054433, 
            "read2_qc_failed": 0, 
            "paired_properly": 26108866, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 26108866, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 67897, 
        "Np": 0, 
        "N_opt": 67897, 
        "N_consv": 67897, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 280, 
            "corr_est_frag_len": 0.304410299872718, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2693694, 
            "argmin_corr": 1500, 
            "min_corr": 0.2170543, 
            "NSC": 1.402462, 
            "RSC": 1.669805
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.547658362702
        }, 
        "rep1-pr1": {
            "FRiP": 0.554185853622
        }, 
        "rep1-pr2": {
            "FRiP": 0.553739875576
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.534907318255
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0835952119313, 
            "auc": 0.493952831241, 
            "ch_div": 0.399935222802, 
            "elbow_pt": 1.90068553369e-234, 
            "jsd": 0.826553053325, 
            "syn_auc": 0.503459854348, 
            "syn_elbow_pt": 0.365140577896, 
            "syn_jsd": 0.571391950557
        }
    ]
}