/cemt/A36010_3_lane_gembs/C6HN2ANXX_7_1

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SAMPLE A36010_3_lane_gembs LANE C6HN2ANXX_7_1

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 515407896 100.00 % 257703948 100.00 % 257703948 100.00 %
General Reads 506930968 98.36 % 254110237 98.61 % 252820731 98.11 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 51261 0.01 % 25677 0.01 % 25584 0.01 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8425667 1.63 % 3568034 1.38 % 4857633 1.88 %
Bisulfite_reads C2T 259927675 50.43 % 130297924 50.56 % 129629751 50.30 %
Bisulfite_reads G2A 247054554 47.93 % 123837990 48.05 % 123216564 47.81 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 207151896
Average Unique 80.38 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 25876193307 39.85 % 11379342483 35.04 % 14496850824 44.65 %
Base Counts Overall C 6398749879 9.85 % 203021579 0.63 % 6195728300 19.08 %
Base Counts Overall G 6451207573 9.93 % 6224098525 19.17 % 227109048 0.70 %
Base Counts Overall T 25696908933 39.57 % 14406370380 44.37 % 11290538553 34.77 %
Base Counts Overall N 518335204 0.80 % 257864481 0.79 % 260470723 0.80 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9938737023325559
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 234116881



Mapping Quality

Mapping Quality Histogram
C6HN2ANXX_7_1.mapq.png



Read Length

Read Length Reads
125 257703948
125 257703948



Insert Size Plot

Insert Size Histogram
C6HN2ANXX_7_1.isize.png