/cemt/A36000_3_lane_gembs/C46BBANXX_1_1

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SAMPLE A36000_3_lane_gembs LANE C46BBANXX_1_1

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 497989148 100.00 % 248994574 100.00 % 248994574 100.00 %
General Reads 488118993 98.02 % 245659417 98.66 % 242459576 97.38 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 74711 0.02 % 37610 0.02 % 37101 0.01 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 9795444 1.97 % 3297547 1.32 % 6497897 2.61 %
Bisulfite_reads C2T 248373763 49.88 % 124975897 50.19 % 123397866 49.56 %
Bisulfite_reads G2A 239819941 48.16 % 120721130 48.48 % 119098811 47.83 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 186941707
Average Unique 75.08 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 24796504839 39.52 % 10371010423 33.06 % 14425494416 45.98 %
Base Counts Overall C 6281696617 10.01 % 271759040 0.87 % 6009937577 19.16 %
Base Counts Overall G 6421406966 10.23 % 6087863878 19.40 % 333543088 1.06 %
Base Counts Overall T 24679328872 39.33 % 14393148193 45.88 % 10286180679 32.79 %
Base Counts Overall N 567695354 0.90 % 249534790 0.80 % 318160564 1.01 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9945646265414667
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 210803504



Mapping Quality

Mapping Quality Histogram
C46BBANXX_1_1.mapq.png



Read Length

Read Length Reads
125 248994574
125 248994574



Insert Size Plot

Insert Size Histogram
C46BBANXX_1_1.isize.png