{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 116584020, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 108771418, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.3, 
            "paired": 116584020, 
            "paired_qc_failed": 0, 
            "read1": 58292010, 
            "read1_qc_failed": 0, 
            "read2": 58292010, 
            "read2_qc_failed": 0, 
            "paired_properly": 101930094, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 87.43, 
            "with_itself": 106253143, 
            "with_itself_qc_failed": 0, 
            "singletons": 2518275, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.16, 
            "diff_chroms": 3040466, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 153902130, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 147991110, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.16, 
            "paired": 153902130, 
            "paired_qc_failed": 0, 
            "read1": 76951065, 
            "read1_qc_failed": 0, 
            "read2": 76951065, 
            "read2_qc_failed": 0, 
            "paired_properly": 138621783, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.07, 
            "with_itself": 144978594, 
            "with_itself_qc_failed": 0, 
            "singletons": 3012516, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.96, 
            "diff_chroms": 4251163, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 43585280, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 593290, 
            "paired_opt_dupes": 3116, 
            "dupes_pct": 0.013612
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 58423843, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 818600, 
            "paired_opt_dupes": 6310, 
            "dupes_pct": 0.014011
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 43585199, 
            "distinct_read_pairs": 42991911, 
            "one_read_pair": 42405637, 
            "two_read_pair": 579356, 
            "NRF": 0.986388, 
            "PBC1": 0.986363, 
            "PBC2": 73.194438
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 58422690, 
            "distinct_read_pairs": 57604109, 
            "one_read_pair": 56795332, 
            "two_read_pair": 799080, 
            "NRF": 0.985989, 
            "PBC1": 0.98596, 
            "PBC2": 71.075902
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 85983980, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 85983980, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 85983980, 
            "paired_qc_failed": 0, 
            "read1": 42991990, 
            "read1_qc_failed": 0, 
            "read2": 42991990, 
            "read2_qc_failed": 0, 
            "paired_properly": 85983980, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 85983980, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 115210486, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 115210486, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 115210486, 
            "paired_qc_failed": 0, 
            "read1": 57605243, 
            "read1_qc_failed": 0, 
            "read2": 57605243, 
            "read2_qc_failed": 0, 
            "paired_properly": 115210486, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 115210486, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 194554, 
        "Np": 0, 
        "N_opt": 194554, 
        "N_consv": 194554, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 265, 
            "corr_est_frag_len": 0.203820855800891, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1924449, 
            "argmin_corr": 1500, 
            "min_corr": 0.1823969, 
            "NSC": 1.117458, 
            "RSC": 2.132157
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.422817690053
        }, 
        "rep1-pr1": {
            "FRiP": 0.346330235324
        }, 
        "rep1-pr2": {
            "FRiP": 0.34713219301
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.275962599104
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.129720909959, 
            "auc": 0.495565241083, 
            "ch_div": 0.375802443467, 
            "elbow_pt": 0.0, 
            "jsd": 0.712367875472, 
            "syn_auc": 0.500471497925, 
            "syn_elbow_pt": 0.078272519211, 
            "syn_jsd": 0.451382004346
        }
    ]
}
