/cemt/A36006_3_lane_gembs/C415FANXX_4_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 385422950 | 100.00 % | 192711475 | 100.00 % | 192711475 | 100.00 % |
| General Reads | 374702584 | 97.22 % | 188771222 | 97.96 % | 185931362 | 96.48 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22329 | 0.01 % | 11224 | 0.01 % | 11105 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 10698037 | 2.78 % | 3929029 | 2.04 % | 6769008 | 3.51 % |
| Bisulfite_reads C2T | 190626557 | 49.46 % | 96013382 | 49.82 % | 94613175 | 49.10 % |
| Bisulfite_reads G2A | 184098356 | 47.77 % | 92769064 | 48.14 % | 91329292 | 47.39 % |
| Concept | Value |
|---|---|
| Unique Fragments | 146111126 |
| Average Unique | 75.82 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 19037390803 | 39.20 % | 8422554757 | 34.69 % | 10614836046 | 43.72 % |
| Base Counts Overall C | 4845007481 | 9.98 % | 287528174 | 1.18 % | 4557479307 | 18.77 % |
| Base Counts Overall G | 4816027956 | 9.92 % | 4632876164 | 19.08 % | 183151792 | 0.75 % |
| Base Counts Overall T | 19041479693 | 39.21 % | 10745144736 | 44.25 % | 8296334957 | 34.17 % |
| Base Counts Overall N | 823385767 | 1.70 % | 193542019 | 0.80 % | 629843748 | 2.59 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.991751864922502 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 166706532 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 192711475 |
| 125 | 192711475 |
| Insert Size Histogram |
|---|
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