/cemt/A36006_3_lane_gembs/C6HN2ANXX_5_1

BACK

SAMPLE A36006_3_lane_gembs LANE C6HN2ANXX_5_1

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 352194268 100.00 % 176097134 100.00 % 176097134 100.00 %
General Reads 347725342 98.73 % 174200959 98.92 % 173524383 98.54 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 19837 0.01 % 9942 0.01 % 9895 0.01 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 4449089 1.26 % 1886233 1.07 % 2562856 1.46 %
Bisulfite_reads C2T 176872712 50.22 % 88595745 50.31 % 88276967 50.13 %
Bisulfite_reads G2A 170872467 48.52 % 85615156 48.62 % 85257311 48.41 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 141489754
Average Unique 80.35 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 17699410386 39.88 % 7731500653 34.85 % 9967909733 44.92 %
Base Counts Overall C 4393850763 9.90 % 163196435 0.74 % 4230654328 19.07 %
Base Counts Overall G 4446823293 10.02 % 4266757185 19.23 % 180066108 0.81 %
Base Counts Overall T 17482359290 39.40 % 9850451185 44.39 % 7631908105 34.40 %
Base Counts Overall N 354034036 0.80 % 176333426 0.79 % 177700610 0.80 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9941668686066997
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 159117490



Mapping Quality

Mapping Quality Histogram
C6HN2ANXX_5_1.mapq.png



Read Length

Read Length Reads
125 176097134
125 176097134



Insert Size Plot

Insert Size Histogram
C6HN2ANXX_5_1.isize.png