/cemt/A36006_3_lane_gembs/C6HN2ANXX_6_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 356863132 | 100.00 % | 178431566 | 100.00 % | 178431566 | 100.00 % |
| General Reads | 352384232 | 98.74 % | 176542170 | 98.94 % | 175842062 | 98.55 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 20327 | 0.01 % | 10203 | 0.01 % | 10124 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4458573 | 1.25 % | 1879193 | 1.05 % | 2579380 | 1.45 % |
| Bisulfite_reads C2T | 179247302 | 50.23 % | 89788945 | 50.32 % | 89458357 | 50.14 % |
| Bisulfite_reads G2A | 173157257 | 48.52 % | 86763428 | 48.63 % | 86393829 | 48.42 % |
| Concept | Value |
|---|---|
| Unique Fragments | 143418476 |
| Average Unique | 80.38 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 17936093841 | 39.89 % | 7835056783 | 34.85 % | 10101037058 | 44.93 % |
| Base Counts Overall C | 4447349829 | 9.89 % | 162183364 | 0.72 % | 4285166465 | 19.06 % |
| Base Counts Overall G | 4504459907 | 10.02 % | 4325297382 | 19.24 % | 179162525 | 0.80 % |
| Base Counts Overall T | 17717806554 | 39.40 % | 9981279005 | 44.40 % | 7736527549 | 34.41 % |
| Base Counts Overall N | 359044501 | 0.80 % | 178560782 | 0.79 % | 180483719 | 0.80 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9942649689994681 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 161267501 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 178431566 |
| 125 | 178431566 |
| Insert Size Histogram |
|---|
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