{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 106005779, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 100517061, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.82, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 31289880, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30322209, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.91, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 83519739, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 16628125, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.199092
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 24379805, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2115581, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.086776
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 83519227, 
            "distinct_read_pairs": 67314662, 
            "one_read_pair": 54119830, 
            "two_read_pair": 10743306, 
            "NRF": 0.805978, 
            "PBC1": 0.803983, 
            "PBC2": 5.03754
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 24373197, 
            "distinct_read_pairs": 22300930, 
            "one_read_pair": 20415454, 
            "two_read_pair": 1741291, 
            "NRF": 0.914978, 
            "PBC1": 0.915453, 
            "PBC2": 11.724321
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 66891614, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 66891614, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 22264224, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22264224, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 113385, 
        "Np": 0, 
        "N_opt": 113385, 
        "N_consv": 113385, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.210270173894768, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2078422, 
            "argmin_corr": 1500, 
            "min_corr": 0.1842731, 
            "NSC": 1.141079, 
            "RSC": 1.103016
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.475899940355
        }, 
        "rep1-pr1": {
            "FRiP": 0.480007739136
        }, 
        "rep1-pr2": {
            "FRiP": 0.479942632797
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.468070238794
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.155812026416, 
            "auc": 0.493364122956, 
            "ch_div": 0.135233586376, 
            "elbow_pt": 1.92924780096e-194, 
            "jsd": 0.843172144372, 
            "syn_auc": 0.50949276108, 
            "syn_elbow_pt": 0.37195208163, 
            "syn_jsd": 0.498723825867
        }
    ]
}
