{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 45572480, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39785297, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 87.3, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 39662449, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39161257, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.74, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 33050355, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 14737935, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.445924
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 31130802, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 997573, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.032045
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33047282, 
            "distinct_read_pairs": 18462841, 
            "one_read_pair": 10066008, 
            "two_read_pair": 4607538, 
            "NRF": 0.55868, 
            "PBC1": 0.545204, 
            "PBC2": 2.184683
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 31094157, 
            "distinct_read_pairs": 30146371, 
            "one_read_pair": 29261900, 
            "two_read_pair": 857353, 
            "NRF": 0.969519, 
            "PBC1": 0.970661, 
            "PBC2": 34.130516
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 18312420, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18312420, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 30133229, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30133229, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 64971, 
        "Np": 0, 
        "N_opt": 64971, 
        "N_consv": 64971, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.149270079805765, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1376432, 
            "argmin_corr": 1500, 
            "min_corr": 0.1267024, 
            "NSC": 1.178115, 
            "RSC": 2.062714
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.216821825595
        }, 
        "rep1-pr1": {
            "FRiP": 0.211635474504
        }, 
        "rep1-pr2": {
            "FRiP": 0.212032531194
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.172723248772
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.204845884215, 
            "auc": 0.487316226566, 
            "ch_div": 0.230409817384, 
            "elbow_pt": 2.12028915418e-52, 
            "jsd": 0.622621327778, 
            "syn_auc": 0.494876826456, 
            "syn_elbow_pt": 0.202231447726, 
            "syn_jsd": 0.333082920866
        }
    ]
}
