{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 33242274, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32195166, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.85, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 36388082, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36009049, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.96, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 21379501, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 660009, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.030871
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 28647216, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5063418, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.176751
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 21379254, 
            "distinct_read_pairs": 20736558, 
            "one_read_pair": 20174681, 
            "two_read_pair": 541448, 
            "NRF": 0.969938, 
            "PBC1": 0.972904, 
            "PBC2": 37.260607
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 28645171, 
            "distinct_read_pairs": 23761517, 
            "one_read_pair": 19678510, 
            "two_read_pair": 3441076, 
            "NRF": 0.829512, 
            "PBC1": 0.828167, 
            "PBC2": 5.718708
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 20719492, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20719492, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 23583798, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23583798, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 35060, 
        "Np": 0, 
        "N_opt": 35060, 
        "N_consv": 35060, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -5, 
            "corr_est_frag_len": 0.203990116972919, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2365318, 
            "argmin_corr": 1500, 
            "min_corr": 0.1949399, 
            "NSC": 1.046426, 
            "RSC": 0.2175961
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.110785847347
        }, 
        "rep1-pr1": {
            "FRiP": 0.0902496779083
        }, 
        "rep1-pr2": {
            "FRiP": 0.0897519852551
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0464467999884
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.235695698541, 
            "auc": 0.488073702609, 
            "ch_div": 0.203667123841, 
            "elbow_pt": 2.16970313967e-59, 
            "jsd": 0.615851683614, 
            "syn_auc": 0.52155156005, 
            "syn_elbow_pt": 0.104314259995, 
            "syn_jsd": 0.280452390594
        }
    ]
}