{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 55521885, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 54828343, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.75, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 42306732, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41499832, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.09, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 43716202, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1269126, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.029031
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 33128684, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 418329, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.012627
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 43715824, 
            "distinct_read_pairs": 42494895, 
            "one_read_pair": 41321191, 
            "two_read_pair": 1141609, 
            "NRF": 0.972071, 
            "PBC1": 0.97238, 
            "PBC2": 36.195572
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33113833, 
            "distinct_read_pairs": 32713531, 
            "one_read_pair": 32355243, 
            "two_read_pair": 352252, 
            "NRF": 0.987911, 
            "PBC1": 0.989048, 
            "PBC2": 91.852546
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 42447076, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42447076, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 32710355, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32710355, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 57057, 
        "Np": 0, 
        "N_opt": 57057, 
        "N_consv": 57057, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 240, 
            "corr_est_frag_len": 0.17551486952816, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1794332, 
            "argmin_corr": 1500, 
            "min_corr": 0.1729988, 
            "NSC": 1.014544, 
            "RSC": 0.3910385
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.121219520866
        }, 
        "rep1-pr1": {
            "FRiP": 0.128404033444
        }, 
        "rep1-pr2": {
            "FRiP": 0.128472124878
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0862906596067
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.24043487193, 
            "auc": 0.491666596053, 
            "ch_div": 0.161709078404, 
            "elbow_pt": 8.87146332949e-123, 
            "jsd": 0.590484149579, 
            "syn_auc": 0.499286034569, 
            "syn_elbow_pt": 0.131554556846, 
            "syn_jsd": 0.308273607745
        }
    ]
}
