{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 40705687, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38963877, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.72, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 43852701, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43024456, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.11, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 31151600, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5091974, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.163458
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 35171713, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1644402, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.046754
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 31149162, 
            "distinct_read_pairs": 26126292, 
            "one_read_pair": 21822625, 
            "two_read_pair": 3687736, 
            "NRF": 0.838748, 
            "PBC1": 0.835274, 
            "PBC2": 5.917621
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 34635011, 
            "distinct_read_pairs": 33546117, 
            "one_read_pair": 32520413, 
            "two_read_pair": 992405, 
            "NRF": 0.968561, 
            "PBC1": 0.969424, 
            "PBC2": 32.769296
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 26059626, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26059626, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 33527311, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33527311, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 32389, 
        "Np": 0, 
        "N_opt": 32389, 
        "N_consv": 32389, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 170, 
            "corr_est_frag_len": 0.170340953519848, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1666861, 
            "argmin_corr": 1500, 
            "min_corr": 0.1566392, 
            "NSC": 1.087474, 
            "RSC": 1.363777
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.068844314173
        }, 
        "rep1-pr1": {
            "FRiP": 0.0786129347761
        }, 
        "rep1-pr2": {
            "FRiP": 0.0788484119986
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0245239779594
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.272991806372, 
            "auc": 0.489368082163, 
            "ch_div": 0.150953468193, 
            "elbow_pt": 5.49962895542e-75, 
            "jsd": 0.585020412896, 
            "syn_auc": 0.51503497647, 
            "syn_elbow_pt": 0.048242609651, 
            "syn_jsd": 0.245543121444
        }
    ]
}