{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 19448025, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16826332, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 86.52, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 43852701, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43024456, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.11, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 14220112, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6823490, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.479848
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 35171713, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1644402, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.046754
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 14211152, 
            "distinct_read_pairs": 7557610, 
            "one_read_pair": 3877207, 
            "two_read_pair": 1978514, 
            "NRF": 0.531808, 
            "PBC1": 0.51302, 
            "PBC2": 1.959656
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 34635011, 
            "distinct_read_pairs": 33546117, 
            "one_read_pair": 32520413, 
            "two_read_pair": 992405, 
            "NRF": 0.968561, 
            "PBC1": 0.969424, 
            "PBC2": 32.769296
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 7396622, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 7396622, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 33527311, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33527311, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 24065, 
        "Np": 0, 
        "N_opt": 24065, 
        "N_consv": 24065, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.156182134504374, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.113176, 
            "argmin_corr": 1500, 
            "min_corr": 0.091452, 
            "NSC": 1.707805, 
            "RSC": 2.979662
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.297122933745
        }, 
        "rep1-pr1": {
            "FRiP": 0.308634039445
        }, 
        "rep1-pr2": {
            "FRiP": 0.308941644347
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.265874387901
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.123030905943, 
            "auc": 0.480020657259, 
            "ch_div": 0.49909031657, 
            "elbow_pt": 1.01526296851e-20, 
            "jsd": 0.76687712676, 
            "syn_auc": 0.483008902206, 
            "syn_elbow_pt": 0.256429825441, 
            "syn_jsd": 0.385977490692
        }
    ]
}
