/EXTERNAL BLUEPRINT/K010502_1_lane_gembs/EXTERNAL-K010502_1798744_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 564464354 | 100.00 % | 282232177 | 100.00 % | 282232177 | 100.00 % |
| General Reads | 552412921 | 97.86 % | 277417365 | 98.29 % | 274995556 | 97.44 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2122667 | 0.38 % | 1065226 | 0.38 % | 1057441 | 0.37 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9928766 | 1.76 % | 3749586 | 1.33 % | 6179180 | 2.19 % |
| Bisulfite_reads C2T | 284094652 | 50.33 % | 142658742 | 50.55 % | 141435910 | 50.11 % |
| Bisulfite_reads G2A | 270440936 | 47.91 % | 135823849 | 48.12 % | 134617087 | 47.70 % |
| Concept | Value |
|---|---|
| Unique Fragments | 232995052 |
| Average Unique | 82.55 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 22480053362 | 39.04 % | 8686707707 | 30.18 % | 13793345655 | 47.91 % |
| Base Counts Overall C | 6096026395 | 10.59 % | 270684645 | 0.94 % | 5825341750 | 20.24 % |
| Base Counts Overall G | 6149110085 | 10.68 % | 5890472008 | 20.46 % | 258638077 | 0.90 % |
| Base Counts Overall T | 22256528381 | 38.66 % | 13643494495 | 47.39 % | 8613033886 | 29.92 % |
| Base Counts Overall N | 593645885 | 1.03 % | 296323199 | 1.03 % | 297322686 | 1.03 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9989306430549415 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 267243952 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 282232177 |
| 101 | 282232177 |
| Insert Size Histogram |
|---|
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