{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 47811083, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 46452212, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.16, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 39260479, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38716729, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.62, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 39170786, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4372282, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.111621
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 31031512, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 583030, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.018788
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 39170172, 
            "distinct_read_pairs": 34909534, 
            "one_read_pair": 31085698, 
            "two_read_pair": 3434449, 
            "NRF": 0.891227, 
            "PBC1": 0.890464, 
            "PBC2": 9.051146
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 31013302, 
            "distinct_read_pairs": 30452248, 
            "one_read_pair": 29942627, 
            "two_read_pair": 498807, 
            "NRF": 0.981909, 
            "PBC1": 0.983265, 
            "PBC2": 60.028482
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 34798504, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34798504, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 30448482, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30448482, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 136067, 
        "Np": 0, 
        "N_opt": 136067, 
        "N_consv": 136067, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.193283004171601, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1918691, 
            "argmin_corr": 1500, 
            "min_corr": 0.178249, 
            "NSC": 1.084343, 
            "RSC": 1.103808
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.468144960094
        }, 
        "rep1-pr1": {
            "FRiP": 0.467521720524
        }, 
        "rep1-pr2": {
            "FRiP": 0.467916195782
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.443530502058
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.149523607515, 
            "auc": 0.490805352661, 
            "ch_div": 0.203673121754, 
            "elbow_pt": 1.21221419838e-100, 
            "jsd": 0.788387641101, 
            "syn_auc": 0.503499070247, 
            "syn_elbow_pt": 0.339129652602, 
            "syn_jsd": 0.467087382477
        }
    ]
}