/EXTERNAL BLUEPRINT/methylation/K006388_K006401_24_lane_gembs
BACK
SAMPLE K006388_K006401_24_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
26911811 |
24891676 |
92.49 % |
| NonRefCpG |
257015 |
196260 |
76.36 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
6543335 |
12.31 % |
5982455 |
11.85 % |
47051 |
9.63 % |
27020 |
6.65 % |
| Intermediate (0.3-0.7) |
5566516 |
10.48 % |
4873948 |
9.66 % |
68024 |
13.92 % |
44699 |
10.99 % |
| Methylated (0.7-1) |
41024746 |
77.21 % |
39615317 |
78.49 % |
373658 |
76.45 % |
334841 |
82.36 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.910 |
|
0.910 |
|
0.900 |
|
0.910 |
|