{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 52120463, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 49284068, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.56, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 37331408, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36583324, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 43581102, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 13350923, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.306347
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 29268034, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 616330, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.021058
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 43577916, 
            "distinct_read_pairs": 30668656, 
            "one_read_pair": 22082774, 
            "two_read_pair": 5812626, 
            "NRF": 0.703766, 
            "PBC1": 0.720044, 
            "PBC2": 3.799105
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 29244956, 
            "distinct_read_pairs": 28655527, 
            "one_read_pair": 28140812, 
            "two_read_pair": 502102, 
            "NRF": 0.979845, 
            "PBC1": 0.982038, 
            "PBC2": 56.046007
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 30230179, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30230179, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 28651704, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28651704, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 36657, 
        "Np": 0, 
        "N_opt": 36657, 
        "N_consv": 36657, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.483935964675835, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.4582735, 
            "argmin_corr": 1500, 
            "min_corr": 0.1777117, 
            "NSC": 2.723152, 
            "RSC": 1.091468
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.62646344131
        }, 
        "rep1-pr1": {
            "FRiP": 0.623797213446
        }, 
        "rep1-pr2": {
            "FRiP": 0.623855305811
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.619471217879
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0909517017878, 
            "auc": 0.490105372204, 
            "ch_div": 0.276247865743, 
            "elbow_pt": 9.4699968837e-87, 
            "jsd": 0.904281310104, 
            "syn_auc": 0.507549525661, 
            "syn_elbow_pt": 0.561457239663, 
            "syn_jsd": 0.624535783766
        }
    ]
}
