{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 37283171, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36461367, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.8, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35273864, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34717917, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.42, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 30862595, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2424786, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.078567
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27814058, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1159997, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.041705
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30862143, 
            "distinct_read_pairs": 28584391, 
            "one_read_pair": 26495769, 
            "two_read_pair": 1919125, 
            "NRF": 0.926196, 
            "PBC1": 0.926931, 
            "PBC2": 13.806172
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27802979, 
            "distinct_read_pairs": 26670066, 
            "one_read_pair": 25608519, 
            "two_read_pair": 1019511, 
            "NRF": 0.959252, 
            "PBC1": 0.960197, 
            "PBC2": 25.118433
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 28437809, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28437809, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26654061, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26654061, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 82867, 
        "Np": 0, 
        "N_opt": 82867, 
        "N_consv": 82867, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 280, 
            "corr_est_frag_len": 0.224261145318013, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2196142, 
            "argmin_corr": 1500, 
            "min_corr": 0.1948076, 
            "NSC": 1.151193, 
            "RSC": 1.187328
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.58644530544
        }, 
        "rep1-pr1": {
            "FRiP": 0.572755788332
        }, 
        "rep1-pr2": {
            "FRiP": 0.57316630435
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.570549150449
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.115834398324, 
            "auc": 0.489816494134, 
            "ch_div": 0.262288723524, 
            "elbow_pt": 7.78882460919e-82, 
            "jsd": 0.849442394047, 
            "syn_auc": 0.518545564075, 
            "syn_elbow_pt": 0.42501580374, 
            "syn_jsd": 0.531554584224
        }
    ]
}
