{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 38863325, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37983958, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.74, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35174441, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34232593, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.32, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 31103687, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3026255, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.097296
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 30067338, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 583196, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.019396
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 31103562, 
            "distinct_read_pairs": 28141889, 
            "one_read_pair": 25449202, 
            "two_read_pair": 2448605, 
            "NRF": 0.90478, 
            "PBC1": 0.904317, 
            "PBC2": 10.393347
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 30063335, 
            "distinct_read_pairs": 29495264, 
            "one_read_pair": 28990165, 
            "two_read_pair": 491972, 
            "NRF": 0.981104, 
            "PBC1": 0.982875, 
            "PBC2": 58.926453
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 28077432, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28077432, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 29484142, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29484142, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 89589, 
        "Np": 0, 
        "N_opt": 89589, 
        "N_consv": 89589, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.233623982288711, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2329781, 
            "argmin_corr": 1500, 
            "min_corr": 0.2204037, 
            "NSC": 1.059982, 
            "RSC": 1.051367
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.718932292417
        }, 
        "rep1-pr1": {
            "FRiP": 0.682260133573
        }, 
        "rep1-pr2": {
            "FRiP": 0.682076902518
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.680405528834
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0718254730388, 
            "auc": 0.489755046382, 
            "ch_div": 0.434164910611, 
            "elbow_pt": 7.72633439064e-81, 
            "jsd": 0.862002023296, 
            "syn_auc": 0.49858715623, 
            "syn_elbow_pt": 0.47112022363, 
            "syn_jsd": 0.581024099842
        }
    ]
}
