{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 23504962, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23000052, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.85, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35174441, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34232593, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.32, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 18920419, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3247516, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.171641
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 30067338, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 583196, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.019396
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 18920331, 
            "distinct_read_pairs": 15717506, 
            "one_read_pair": 12997548, 
            "two_read_pair": 2303175, 
            "NRF": 0.83072, 
            "PBC1": 0.826947, 
            "PBC2": 5.643318
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 30063335, 
            "distinct_read_pairs": 29495264, 
            "one_read_pair": 28990165, 
            "two_read_pair": 491972, 
            "NRF": 0.981104, 
            "PBC1": 0.982875, 
            "PBC2": 58.926453
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 15672903, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 15672903, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 29484142, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29484142, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 90829, 
        "Np": 0, 
        "N_opt": 90829, 
        "N_consv": 90829, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.187085771971741, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1859845, 
            "argmin_corr": 1500, 
            "min_corr": 0.1640705, 
            "NSC": 1.140277, 
            "RSC": 1.050256
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.495166316794
        }, 
        "rep1-pr1": {
            "FRiP": 0.469266435064
        }, 
        "rep1-pr2": {
            "FRiP": 0.469718614953
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.45922131107
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.128578029076, 
            "auc": 0.48629902005, 
            "ch_div": 0.344420141791, 
            "elbow_pt": 8.7533707697e-45, 
            "jsd": 0.78972117703, 
            "syn_auc": 0.521122439594, 
            "syn_elbow_pt": 0.356975735777, 
            "syn_jsd": 0.457108520003
        }
    ]
}