{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 33670319, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31461933, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.44, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35054075, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34623080, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.77, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 27704149, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6148237, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.221925
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 28059275, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2430888, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.086634
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 27703678, 
            "distinct_read_pairs": 21779129, 
            "one_read_pair": 17336153, 
            "two_read_pair": 3354304, 
            "NRF": 0.786146, 
            "PBC1": 0.795998, 
            "PBC2": 5.168331
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 28046677, 
            "distinct_read_pairs": 25671720, 
            "one_read_pair": 23510674, 
            "two_read_pair": 2000216, 
            "NRF": 0.915321, 
            "PBC1": 0.91582, 
            "PBC2": 11.754068
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21555912, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21555912, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 25628387, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25628387, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 30742, 
        "Np": 0, 
        "N_opt": 30742, 
        "N_consv": 30742, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.488955598085364, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.4398414, 
            "argmin_corr": 1500, 
            "min_corr": 0.1727454, 
            "NSC": 2.830498, 
            "RSC": 1.183882
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.609608833904
        }, 
        "rep1-pr1": {
            "FRiP": 0.606596887717
        }, 
        "rep1-pr2": {
            "FRiP": 0.606568867024
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.60420102565
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0935505615582, 
            "auc": 0.488248074602, 
            "ch_div": 0.327833913798, 
            "elbow_pt": 3.40818021614e-61, 
            "jsd": 0.896869889279, 
            "syn_auc": 0.515176974938, 
            "syn_elbow_pt": 0.544216617003, 
            "syn_jsd": 0.60521474816
        }
    ]
}
