{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 48049311, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37274665, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 77.58, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 47796431, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47284505, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.93, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 30392587, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8500663, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.279695
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 37653209, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5043719, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.133952
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30391987, 
            "distinct_read_pairs": 22143723, 
            "one_read_pair": 15969625, 
            "two_read_pair": 4600150, 
            "NRF": 0.728604, 
            "PBC1": 0.721181, 
            "PBC2": 3.471544
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 37648844, 
            "distinct_read_pairs": 32792070, 
            "one_read_pair": 28566296, 
            "two_read_pair": 3726245, 
            "NRF": 0.870998, 
            "PBC1": 0.871134, 
            "PBC2": 7.666242
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21891924, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21891924, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 32609490, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32609490, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 102059, 
        "Np": 0, 
        "N_opt": 102059, 
        "N_consv": 102059, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.172341330652762, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1626643, 
            "argmin_corr": 1500, 
            "min_corr": 0.1513073, 
            "NSC": 1.139015, 
            "RSC": 1.852076
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.361884632313
        }, 
        "rep1-pr1": {
            "FRiP": 0.334174939061
        }, 
        "rep1-pr2": {
            "FRiP": 0.334387106877
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.316226057757
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.180501012851, 
            "auc": 0.488401611291, 
            "ch_div": 0.223820110602, 
            "elbow_pt": 7.55474856876e-63, 
            "jsd": 0.721980750699, 
            "syn_auc": 0.520370411304, 
            "syn_elbow_pt": 0.265767683191, 
            "syn_jsd": 0.390000364428
        }
    ]
}