{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 38122716, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37308612, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.86, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 34897613, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34404879, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.59, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 30428473, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3078820, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.101182
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27598095, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 363852, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.013184
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30427559, 
            "distinct_read_pairs": 27423197, 
            "one_read_pair": 24700310, 
            "two_read_pair": 2470885, 
            "NRF": 0.901262, 
            "PBC1": 0.900709, 
            "PBC2": 9.996544
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27575728, 
            "distinct_read_pairs": 27231977, 
            "one_read_pair": 26916138, 
            "two_read_pair": 309946, 
            "NRF": 0.987534, 
            "PBC1": 0.988402, 
            "PBC2": 86.841379
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 27349653, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27349653, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27234243, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27234243, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 101302, 
        "Np": 0, 
        "N_opt": 101302, 
        "N_consv": 101302, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 235, 
            "corr_est_frag_len": 0.209193050634822, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2061042, 
            "argmin_corr": 1500, 
            "min_corr": 0.1962367, 
            "NSC": 1.066024, 
            "RSC": 1.313038
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.579320000151
        }, 
        "rep1-pr1": {
            "FRiP": 0.574252747647
        }, 
        "rep1-pr2": {
            "FRiP": 0.574061118018
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.554301662091
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.113424363769, 
            "auc": 0.489611823066, 
            "ch_div": 0.292636162615, 
            "elbow_pt": 1.35339668812e-78, 
            "jsd": 0.842118942608, 
            "syn_auc": 0.50424612314, 
            "syn_elbow_pt": 0.401771286786, 
            "syn_jsd": 0.517771883842
        }
    ]
}