{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 57769175, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56960171, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.6, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 42877853, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42209687, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.44, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 47447468, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1801489, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.037968
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 33619125, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 589378, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.017531
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 47445020, 
            "distinct_read_pairs": 45697280, 
            "one_read_pair": 44057022, 
            "two_read_pair": 1574234, 
            "NRF": 0.963163, 
            "PBC1": 0.964106, 
            "PBC2": 27.986324
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33590190, 
            "distinct_read_pairs": 33031893, 
            "one_read_pair": 32545220, 
            "two_read_pair": 476947, 
            "NRF": 0.983379, 
            "PBC1": 0.985267, 
            "PBC2": 68.236555
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 45645979, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 45645979, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 33029747, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33029747, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 132428, 
        "Np": 0, 
        "N_opt": 132428, 
        "N_consv": 132428, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.189074965974207, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1935045, 
            "argmin_corr": 1500, 
            "min_corr": 0.1773632, 
            "NSC": 1.066033, 
            "RSC": 0.7255779
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.373317934973
        }, 
        "rep1-pr1": {
            "FRiP": 0.377970889467
        }, 
        "rep1-pr2": {
            "FRiP": 0.377696476763
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.357895978954
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.200491882737, 
            "auc": 0.491967480148, 
            "ch_div": 0.135984133585, 
            "elbow_pt": 2.94629402482e-132, 
            "jsd": 0.766804084962, 
            "syn_auc": 0.5016074493, 
            "syn_elbow_pt": 0.273952629488, 
            "syn_jsd": 0.402430443031
        }
    ]
}
