{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 25449866, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24324217, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.58, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 38928086, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37152907, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.44, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 15928499, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 611796, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.038409
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 29612635, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 478240, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.01615
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 15928400, 
            "distinct_read_pairs": 15329761, 
            "one_read_pair": 14792871, 
            "two_read_pair": 514732, 
            "NRF": 0.962417, 
            "PBC1": 0.964977, 
            "PBC2": 28.738977
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 29610239, 
            "distinct_read_pairs": 29144616, 
            "one_read_pair": 28748163, 
            "two_read_pair": 385953, 
            "NRF": 0.984275, 
            "PBC1": 0.986397, 
            "PBC2": 74.486176
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 15316703, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 15316703, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 29134395, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29134395, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 31997, 
        "Np": 0, 
        "N_opt": 31997, 
        "N_consv": 31997, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.203471410083425, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2373202, 
            "argmin_corr": 1500, 
            "min_corr": 0.1931642, 
            "NSC": 1.05336, 
            "RSC": 0.2334268
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.117374943591
        }, 
        "rep1-pr1": {
            "FRiP": 0.102938587969
        }, 
        "rep1-pr2": {
            "FRiP": 0.103305509941
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0463062709446
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.218495322956, 
            "auc": 0.486129065956, 
            "ch_div": 0.263722224666, 
            "elbow_pt": 1.12257569103e-43, 
            "jsd": 0.618018929413, 
            "syn_auc": 0.50477171687, 
            "syn_elbow_pt": 0.123405253521, 
            "syn_jsd": 0.273558028133
        }
    ]
}