{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 52342753, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50908158, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.26, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 82287945, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80078197, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.31, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 36772899, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3353602, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.091198
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 64061575, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3271286, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.051065
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36771506, 
            "distinct_read_pairs": 33485491, 
            "one_read_pair": 30569413, 
            "two_read_pair": 2683437, 
            "NRF": 0.910637, 
            "PBC1": 0.912915, 
            "PBC2": 11.391888
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 63970344, 
            "distinct_read_pairs": 60866155, 
            "one_read_pair": 58002997, 
            "two_read_pair": 2729232, 
            "NRF": 0.951475, 
            "PBC1": 0.95296, 
            "PBC2": 21.252498
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33419297, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33419297, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 60790289, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 60790289, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 56027, 
        "Np": 0, 
        "N_opt": 56027, 
        "N_consv": 56027, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.183788361179333, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2082096, 
            "argmin_corr": 1500, 
            "min_corr": 0.1759605, 
            "NSC": 1.044486, 
            "RSC": 0.2427302
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.157019218391
        }, 
        "rep1-pr1": {
            "FRiP": 0.11148194149
        }, 
        "rep1-pr2": {
            "FRiP": 0.112216812844
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0425986892011
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.243319147499, 
            "auc": 0.490605772718, 
            "ch_div": 0.148817616199, 
            "elbow_pt": 2.32974073227e-96, 
            "jsd": 0.641216291865, 
            "syn_auc": 0.501090156755, 
            "syn_elbow_pt": 0.167282496906, 
            "syn_jsd": 0.301275391113
        }
    ]
}