/EXTERNAL BLUEPRINT/K006381_K006410_26_lane_gembs/S00UJK.Bisulfite-Seq.DNA_Methylation.EGAX00001345082_11
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 819655344 | 100.00 % | 409827672 | 100.00 % | 409827672 | 100.00 % |
| General Reads | 803879003 | 98.08 % | 403357346 | 98.42 % | 400521657 | 97.73 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3335896 | 0.41 % | 1672177 | 0.41 % | 1663719 | 0.41 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 12440445 | 1.52 % | 4798149 | 1.17 % | 7642296 | 1.86 % |
| Bisulfite_reads C2T | 412563478 | 50.33 % | 206989578 | 50.51 % | 205573900 | 50.16 % |
| Bisulfite_reads G2A | 394651421 | 48.15 % | 198039945 | 48.32 % | 196611476 | 47.97 % |
| Concept | Value |
|---|---|
| Unique Fragments | 340557185 |
| Average Unique | 83.10 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 32459785159 | 38.83 % | 12418942997 | 29.71 % | 20040842162 | 47.94 % |
| Base Counts Overall C | 8932015293 | 10.68 % | 342226964 | 0.82 % | 8589788329 | 20.55 % |
| Base Counts Overall G | 9014588469 | 10.78 % | 8686758912 | 20.78 % | 327829557 | 0.78 % |
| Base Counts Overall T | 32359827495 | 38.71 % | 19939609929 | 47.70 % | 12420217566 | 29.71 % |
| Base Counts Overall N | 838628672 | 1.00 % | 414883742 | 0.99 % | 423744930 | 1.01 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9989445863520564 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 391565468 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 101 | 409827672 |
| 101 | 409827672 |
| Insert Size Histogram |
|---|
 |