/EXTERNAL BLUEPRINT/methylation/K006381_K006410_26_lane_gembs
BACK
SAMPLE K006381_K006410_26_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
26898356 |
23680605 |
88.04 % |
| NonRefCpG |
251684 |
179650 |
71.38 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
10004642 |
18.85 % |
8900027 |
18.15 % |
80786 |
16.83 % |
53667 |
13.94 % |
| Intermediate (0.3-0.7) |
11594129 |
21.84 % |
10257154 |
20.91 % |
127178 |
26.49 % |
94911 |
24.66 % |
| Methylated (0.7-1) |
31476512 |
59.31 % |
29890285 |
60.94 % |
272102 |
56.68 % |
236364 |
61.40 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.790 |
|
0.800 |
|
0.760 |
|
0.790 |
|