{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 39577206, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38909662, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.31, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 39597419, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39009400, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.52, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 31782508, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2785066, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.087629
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 31089412, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 613601, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.019737
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 31782318, 
            "distinct_read_pairs": 29057073, 
            "one_read_pair": 26559057, 
            "two_read_pair": 2290125, 
            "NRF": 0.914253, 
            "PBC1": 0.914031, 
            "PBC2": 11.597208
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 31083802, 
            "distinct_read_pairs": 30482265, 
            "one_read_pair": 29935167, 
            "two_read_pair": 534836, 
            "NRF": 0.980648, 
            "PBC1": 0.982052, 
            "PBC2": 55.970741
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 28997442, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28997442, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 30475811, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30475811, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 90697, 
        "Np": 0, 
        "N_opt": 90697, 
        "N_consv": 90697, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.237095630125926, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2362459, 
            "argmin_corr": 1500, 
            "min_corr": 0.2239706, 
            "NSC": 1.058601, 
            "RSC": 1.069223
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.744633604482
        }, 
        "rep1-pr1": {
            "FRiP": 0.708016530391
        }, 
        "rep1-pr2": {
            "FRiP": 0.707839321072
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.70656558998
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0638536632738, 
            "auc": 0.489916828519, 
            "ch_div": 0.4806767245, 
            "elbow_pt": 1.72576394448e-83, 
            "jsd": 0.862667791609, 
            "syn_auc": 0.494736982085, 
            "syn_elbow_pt": 0.470141406071, 
            "syn_jsd": 0.589013452229
        }
    ]
}