{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 20781803, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17597168, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 84.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 43140556, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42445822, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.39, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 14263667, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2115603, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.148321
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 33761727, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3271334, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.096895
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 14263366, 
            "distinct_read_pairs": 12211270, 
            "one_read_pair": 10452430, 
            "two_read_pair": 1506512, 
            "NRF": 0.856128, 
            "PBC1": 0.855966, 
            "PBC2": 6.938166
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33759246, 
            "distinct_read_pairs": 30552324, 
            "one_read_pair": 27703835, 
            "two_read_pair": 2584530, 
            "NRF": 0.905006, 
            "PBC1": 0.906767, 
            "PBC2": 10.7191
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 12148064, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12148064, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 30490393, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30490393, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 61286, 
        "Np": 0, 
        "N_opt": 61286, 
        "N_consv": 61286, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.197345138483533, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1781341, 
            "argmin_corr": 1500, 
            "min_corr": 0.1477584, 
            "NSC": 1.335593, 
            "RSC": 1.632448
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.274597172214
        }, 
        "rep1-pr1": {
            "FRiP": 0.299269251001
        }, 
        "rep1-pr2": {
            "FRiP": 0.299524161067
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.221350121656
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.184775997798, 
            "auc": 0.484404709874, 
            "ch_div": 0.30900646575, 
            "elbow_pt": 2.16586588761e-34, 
            "jsd": 0.599925226021, 
            "syn_auc": 0.488258957863, 
            "syn_elbow_pt": 0.226794587703, 
            "syn_jsd": 0.34211536864
        }
    ]
}
