{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 40838895, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22415652, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 54.89, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 59009332, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 58092553, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.45, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 18033861, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6003604, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.332907
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 46364194, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2330918, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.050274
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 18032096, 
            "distinct_read_pairs": 12146375, 
            "one_read_pair": 8164660, 
            "two_read_pair": 2649343, 
            "NRF": 0.673598, 
            "PBC1": 0.672189, 
            "PBC2": 3.081768
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 46348220, 
            "distinct_read_pairs": 44108152, 
            "one_read_pair": 42018795, 
            "two_read_pair": 1996849, 
            "NRF": 0.951669, 
            "PBC1": 0.952631, 
            "PBC2": 21.04255
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 12030257, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12030257, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 44033276, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44033276, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 45008, 
        "Np": 0, 
        "N_opt": 45008, 
        "N_consv": 45008, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.175071594733427, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1400549, 
            "argmin_corr": 1500, 
            "min_corr": 0.1213861, 
            "NSC": 1.442271, 
            "RSC": 2.875684
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.200657589009
        }, 
        "rep1-pr1": {
            "FRiP": 0.222465964602
        }, 
        "rep1-pr2": {
            "FRiP": 0.222374852171
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.152248124422
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.194875834743, 
            "auc": 0.484327566347, 
            "ch_div": 0.306611299268, 
            "elbow_pt": 4.79018501864e-34, 
            "jsd": 0.583922794867, 
            "syn_auc": 0.523765037417, 
            "syn_elbow_pt": 0.217077689209, 
            "syn_jsd": 0.311909193311
        }
    ]
}
