{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 38309894, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35739925, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.29, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 37289345, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36185462, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 29403863, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 11419901, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.388381
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 29363263, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1534434, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.052257
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 29398575, 
            "distinct_read_pairs": 18218542, 
            "one_read_pair": 11078227, 
            "two_read_pair": 4534890, 
            "NRF": 0.619708, 
            "PBC1": 0.608074, 
            "PBC2": 2.442888
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 29086343, 
            "distinct_read_pairs": 27842178, 
            "one_read_pair": 26681657, 
            "two_read_pair": 1113529, 
            "NRF": 0.957225, 
            "PBC1": 0.958318, 
            "PBC2": 23.961349
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 17983962, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17983962, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27828829, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27828829, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 17402, 
        "Np": 0, 
        "N_opt": 17402, 
        "N_consv": 17402, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 155, 
            "corr_est_frag_len": 0.135908857773921, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1363484, 
            "argmin_corr": 1500, 
            "min_corr": 0.1268067, 
            "NSC": 1.071779, 
            "RSC": 0.9539384
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0663389825758
        }, 
        "rep1-pr1": {
            "FRiP": 0.0599143448372
        }, 
        "rep1-pr2": {
            "FRiP": 0.0597962197296
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0185703347145
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.2420815799, 
            "auc": 0.487193260315, 
            "ch_div": 0.197135396882, 
            "elbow_pt": 2.20899883824e-51, 
            "jsd": 0.568764070104, 
            "syn_auc": 0.507957633485, 
            "syn_elbow_pt": 0.0980272606719, 
            "syn_jsd": 0.270291767451
        }
    ]
}