/EXTERNAL BLUEPRINT/K006396_K006409_19_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 2022203864 | 100.00 % | 1011101932 | 100.00 % | 1011101932 | 100.00 % |
| General Reads | 1944778957 | 96.17 % | 975885505 | 96.52 % | 968893452 | 95.83 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 33630418 | 1.66 % | 16857270 | 1.67 % | 16773148 | 1.66 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 43794489 | 2.17 % | 18359157 | 1.82 % | 25435332 | 2.52 % |
| Bisulfite_reads C2T | 1029482380 | 50.91 % | 516592951 | 51.09 % | 512889429 | 50.73 % |
| Bisulfite_reads G2A | 948926995 | 46.93 % | 476149824 | 47.09 % | 472777171 | 46.76 % |
| Concept | Value |
|---|---|
| Unique Fragments | 805456000 |
| Average Unique | 79.66 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 75706155204 | 36.70 % | 29695336918 | 28.79 % | 46010818286 | 44.61 % |
| Base Counts Overall C | 26494453583 | 12.84 % | 1405972553 | 1.36 % | 25088481030 | 24.33 % |
| Base Counts Overall G | 26771983131 | 12.98 % | 25410887875 | 24.64 % | 1361095256 | 1.32 % |
| Base Counts Overall T | 75188284024 | 36.45 % | 45584727754 | 44.20 % | 29603556270 | 28.70 % |
| Base Counts Overall N | 2103918186 | 1.02 % | 1035471964 | 1.00 % | 1068446222 | 1.04 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9991996206809505 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 956000386 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
 |
| LANE REPORTS |
|---|
| UMCG00021.Bisulfite-Seq.DNA_Methylation.EGAX00001345067_11 |
| UMCG00021.Bisulfite-Seq.DNA_Methylation.EGAX00001345081_8 |