{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 41358117, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40213553, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.23, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 31293218, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30871948, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 32402713, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2997112, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.092496
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 24708770, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2617870, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.105949
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32402630, 
            "distinct_read_pairs": 29480174, 
            "one_read_pair": 26814324, 
            "two_read_pair": 2433611, 
            "NRF": 0.909808, 
            "PBC1": 0.909571, 
            "PBC2": 11.018328
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 24705398, 
            "distinct_read_pairs": 22139155, 
            "one_read_pair": 19845517, 
            "two_read_pair": 2074295, 
            "NRF": 0.896126, 
            "PBC1": 0.896399, 
            "PBC2": 9.567355
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 29405601, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29405601, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 22090900, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22090900, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 115836, 
        "Np": 0, 
        "N_opt": 115836, 
        "N_consv": 115836, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.203474717137477, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2022998, 
            "argmin_corr": 1500, 
            "min_corr": 0.1928951, 
            "NSC": 1.054846, 
            "RSC": 1.124928
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.486630520847
        }, 
        "rep1-pr1": {
            "FRiP": 0.478169100348
        }, 
        "rep1-pr2": {
            "FRiP": 0.478583544858
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.4545386902
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.138190448527, 
            "auc": 0.489988479048, 
            "ch_div": 0.232381131366, 
            "elbow_pt": 1.04695278136e-84, 
            "jsd": 0.80743701192, 
            "syn_auc": 0.499967348178, 
            "syn_elbow_pt": 0.353169891274, 
            "syn_jsd": 0.483710331775
        }
    ]
}