{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 35417430, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24663155, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 69.64, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 26517423, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25993813, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.03, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 20183797, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7724579, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.382712
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 21096073, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8631034, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.40913
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 20183449, 
            "distinct_read_pairs": 12695562, 
            "one_read_pair": 7610978, 
            "two_read_pair": 3365597, 
            "NRF": 0.629009, 
            "PBC1": 0.599499, 
            "PBC2": 2.261405
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 21094119, 
            "distinct_read_pairs": 12639350, 
            "one_read_pair": 7416294, 
            "two_read_pair": 3180940, 
            "NRF": 0.599188, 
            "PBC1": 0.586762, 
            "PBC2": 2.331479
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 12459218, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12459218, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 12465039, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12465039, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 86607, 
        "Np": 0, 
        "N_opt": 86607, 
        "N_consv": 86607, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 245, 
            "corr_est_frag_len": 0.210124896437725, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1954473, 
            "argmin_corr": 1500, 
            "min_corr": 0.1622584, 
            "NSC": 1.295001, 
            "RSC": 1.442246
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.737764752303
        }, 
        "rep1-pr1": {
            "FRiP": 0.710404298771
        }, 
        "rep1-pr2": {
            "FRiP": 0.710613785821
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.702393305275
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0478699056552, 
            "auc": 0.484597334972, 
            "ch_div": 0.657731109574, 
            "elbow_pt": 2.82260433068e-35, 
            "jsd": 0.845205868358, 
            "syn_auc": 0.485689033786, 
            "syn_elbow_pt": 0.401030344543, 
            "syn_jsd": 0.548553579119
        }
    ]
}
