{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 34537576, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30297053, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 87.72, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 38004371, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37274266, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.08, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25002079, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 17808799, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.712293
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 30342518, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1344329, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.044305
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24987516, 
            "distinct_read_pairs": 7540589, 
            "one_read_pair": 2042783, 
            "two_read_pair": 1600671, 
            "NRF": 0.301774, 
            "PBC1": 0.270905, 
            "PBC2": 1.276204
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 30097212, 
            "distinct_read_pairs": 29007917, 
            "one_read_pair": 27990738, 
            "two_read_pair": 980841, 
            "NRF": 0.963807, 
            "PBC1": 0.964934, 
            "PBC2": 28.537488
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 7193280, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 7193280, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 28998189, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28998189, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 18759, 
        "Np": 0, 
        "N_opt": 18759, 
        "N_consv": 18759, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.118917873137351, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.08072245, 
            "argmin_corr": 1500, 
            "min_corr": 0.06932692, 
            "NSC": 1.71532, 
            "RSC": 4.351787
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.161415448425
        }, 
        "rep1-pr1": {
            "FRiP": 0.196375464451
        }, 
        "rep1-pr2": {
            "FRiP": 0.196097898316
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.131327120248
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.173113256368, 
            "auc": 0.479741147904, 
            "ch_div": 0.423056776242, 
            "elbow_pt": 3.87113743982e-20, 
            "jsd": 0.706874007845, 
            "syn_auc": 0.503714221927, 
            "syn_elbow_pt": 0.187743589595, 
            "syn_jsd": 0.283624016804
        }
    ]
}