{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 36004991, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35162615, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.66, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 33966705, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33413381, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.37, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 28454421, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1584577, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.055688
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 26742737, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1398759, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.052304
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 28453733, 
            "distinct_read_pairs": 26934485, 
            "one_read_pair": 25502221, 
            "two_read_pair": 1355400, 
            "NRF": 0.946606, 
            "PBC1": 0.946824, 
            "PBC2": 18.815273
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 26730715, 
            "distinct_read_pairs": 25367621, 
            "one_read_pair": 24099544, 
            "two_read_pair": 1207186, 
            "NRF": 0.949006, 
            "PBC1": 0.950012, 
            "PBC2": 19.963406
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 26869844, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26869844, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 25343978, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25343978, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 101848, 
        "Np": 0, 
        "N_opt": 101848, 
        "N_consv": 101848, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 240, 
            "corr_est_frag_len": 0.189279867248927, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1898314, 
            "argmin_corr": 1500, 
            "min_corr": 0.1826357, 
            "NSC": 1.036379, 
            "RSC": 0.9233581
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.431638900937
        }, 
        "rep1-pr1": {
            "FRiP": 0.414904284137
        }, 
        "rep1-pr2": {
            "FRiP": 0.415018839033
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.396766797868
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.167077303973, 
            "auc": 0.489522318136, 
            "ch_div": 0.202989359703, 
            "elbow_pt": 3.05109749956e-77, 
            "jsd": 0.787082095431, 
            "syn_auc": 0.508206023602, 
            "syn_elbow_pt": 0.297747819891, 
            "syn_jsd": 0.430100590173
        }
    ]
}